STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C11H11orf49Chromosome 11 open reading frame 49. (331 aa)    
Predicted Functional Partners:
LRRC49
Leucine rich repeat containing 49.
    
 
 0.860
TTLL1
Tubulin tyrosine ligase-like family, member 1.
    
 
 0.816
TPGS2
Tubulin polyglutamylase complex subunit 2.
    
   0.815
C12H12orf10
Chromosome 12 open reading frame 10.
      
 0.783
NICN1
NICN1 isoform 2.
    
   0.783
MFSD5
Major facilitator superfamily domain containing 5.
      
 0.719
ARHGAP1
Rho GTPase activating protein 1.
      
 0.685
ZNF408
Zinc finger protein 408.
      
 0.662
PFDN5
Prefoldin subunit 5.
      
 0.655
PFDN5-2
Prefoldin subunit 5.
      
 0.655
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.