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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCN9LOW QUALITY PROTEIN: epididymal-specific lipocalin-9. (175 aa)    
Predicted Functional Partners:
CK820_G0012002
LCN8 isoform 1; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.905
TTLL11
Tubulin tyrosine ligase like 11.
      
 0.795
PAEP
Progestagen associated endometrial protein; Belongs to the calycin superfamily. Lipocalin family.
   
 
 0.761
CST11
CST11 isoform 1.
   
  
 0.754
ZSCAN20
ZSCAN20 isoform 1.
      
 0.753
TRIM62
Tripartite motif containing 62.
      
 0.752
ZNF362
Zinc finger protein 362.
      
 0.749
EMP3
Epithelial membrane protein 3; Probably involved in cell proliferation and cell-cell interactions; Belongs to the PMP-22/EMP/MP20 family.
      
 0.746
KCNT1
Potassium sodium-activated channel subfamily T member 1.
      
 0.746
GFI1B
Growth factor independent 1B transcriptional repressor.
      
 0.734
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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