Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BIRC2 | RABGGTA | ENSPTRP00000007251 | ENSPTRP00000010544 | Baculoviral IAP repeat containing 2. | Rab geranylgeranyltransferase, alpha subunit. | 0.748 |
BIRC2 | SPINT2 | ENSPTRP00000007251 | ENSPTRP00000065532 | Baculoviral IAP repeat containing 2. | T0106202 isoform 2. | 0.759 |
BIRC2 | STAC2 | ENSPTRP00000007251 | ENSPTRP00000090558 | Baculoviral IAP repeat containing 2. | SH3 and cysteine rich domain 2. | 0.704 |
BIRC2 | STK32A | ENSPTRP00000007251 | ENSPTRP00000059021 | Baculoviral IAP repeat containing 2. | Serine/threonine kinase 32A; Belongs to the protein kinase superfamily. | 0.761 |
BIRC2 | VARS1 | ENSPTRP00000007251 | ENSPTRP00000030618 | Baculoviral IAP repeat containing 2. | VARS isoform 2. | 0.721 |
CK820_G0014442 | HGFAC | ENSPTRP00000068597 | ENSPTRP00000072478 | PRSS3 isoform 6; Belongs to the peptidase S1 family. | HGFAC isoform 1. | 0.489 |
CK820_G0014442 | HGFAC-2 | ENSPTRP00000068597 | ENSPTRP00000073028 | PRSS3 isoform 6; Belongs to the peptidase S1 family. | HGFAC isoform 3. | 0.489 |
CK820_G0014442 | SPINT2 | ENSPTRP00000068597 | ENSPTRP00000065532 | PRSS3 isoform 6; Belongs to the peptidase S1 family. | T0106202 isoform 2. | 0.854 |
HGF | HGFAC | ENSPTRP00000072810 | ENSPTRP00000072478 | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | HGFAC isoform 1. | 0.697 |
HGF | HGFAC-2 | ENSPTRP00000072810 | ENSPTRP00000073028 | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | HGFAC isoform 3. | 0.699 |
HGF | SPINT2 | ENSPTRP00000072810 | ENSPTRP00000065532 | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | T0106202 isoform 2. | 0.781 |
HGFAC | CK820_G0014442 | ENSPTRP00000072478 | ENSPTRP00000068597 | HGFAC isoform 1. | PRSS3 isoform 6; Belongs to the peptidase S1 family. | 0.489 |
HGFAC | HGF | ENSPTRP00000072478 | ENSPTRP00000072810 | HGFAC isoform 1. | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | 0.697 |
HGFAC | SPINT2 | ENSPTRP00000072478 | ENSPTRP00000065532 | HGFAC isoform 1. | T0106202 isoform 2. | 0.729 |
HGFAC | ST14 | ENSPTRP00000072478 | ENSPTRP00000090494 | HGFAC isoform 1. | Suppressor of tumorigenicity 14 protein homolog; Degrades extracellular matrix. Belongs to the peptidase S1 family. | 0.478 |
HGFAC-2 | CK820_G0014442 | ENSPTRP00000073028 | ENSPTRP00000068597 | HGFAC isoform 3. | PRSS3 isoform 6; Belongs to the peptidase S1 family. | 0.489 |
HGFAC-2 | HGF | ENSPTRP00000073028 | ENSPTRP00000072810 | HGFAC isoform 3. | Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily. | 0.699 |
HGFAC-2 | SPINT2 | ENSPTRP00000073028 | ENSPTRP00000065532 | HGFAC isoform 3. | T0106202 isoform 2. | 0.729 |
RABGGTA | BIRC2 | ENSPTRP00000010544 | ENSPTRP00000007251 | Rab geranylgeranyltransferase, alpha subunit. | Baculoviral IAP repeat containing 2. | 0.748 |
RABGGTA | SPINT2 | ENSPTRP00000010544 | ENSPTRP00000065532 | Rab geranylgeranyltransferase, alpha subunit. | T0106202 isoform 2. | 0.828 |
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