SRSF3 protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EIF4A3	HNRNPA2B1	ENSPTRP00000063644	ENSPTRP00000032472	Uncharacterized protein; Belongs to the DEAD box helicase family.	Heterogeneous nuclear ribonucleoprotein A2/B1.	0.570
EIF4A3	MAGOH	ENSPTRP00000063644	ENSPTRP00000001289	Uncharacterized protein; Belongs to the DEAD box helicase family.	Mago-nashi homolog, proliferation-associated.	0.991
EIF4A3	NXF1	ENSPTRP00000063644	ENSPTRP00000006511	Uncharacterized protein; Belongs to the DEAD box helicase family.	Nuclear RNA export factor 1.	0.569
EIF4A3	RBM8A	ENSPTRP00000063644	ENSPTRP00000002050	Uncharacterized protein; Belongs to the DEAD box helicase family.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.991
EIF4A3	SRSF1	ENSPTRP00000063644	ENSPTRP00000090781	Uncharacterized protein; Belongs to the DEAD box helicase family.	Serine and arginine rich splicing factor 1.	0.992
EIF4A3	SRSF2	ENSPTRP00000063644	ENSPTRP00000043428	Uncharacterized protein; Belongs to the DEAD box helicase family.	Serine/arginine-rich splicing factor 2; Necessary for the splicing of pre-mRNA. It is required for formation of the earliest ATP-dependent splicing complex and interacts with spliceosomal components bound to both the 5'- and 3'-splice sites during spliceosome assembly. It also is required for ATP-dependent interactions of both U1 and U2 snRNPs with pre-mRNA. Interacts with other spliceosomal components, via the RS domains, to form a bridge between the 5'- and 3'-splice site binding components, U1 snRNP and U2AF. Binds to purine-rich RNA sequences, either 5'-AGSAGAGTA-3' (S=C or G) or 5 [...]	0.867
EIF4A3	SRSF3	ENSPTRP00000063644	ENSPTRP00000069080	Uncharacterized protein; Belongs to the DEAD box helicase family.	Serine and arginine rich splicing factor 3.	0.939
EIF4A3	SRSF7	ENSPTRP00000063644	ENSPTRP00000020349	Uncharacterized protein; Belongs to the DEAD box helicase family.	Serine and arginine rich splicing factor 7.	0.980
EIF4A3	TRA2B	ENSPTRP00000063644	ENSPTRP00000027026	Uncharacterized protein; Belongs to the DEAD box helicase family.	Transformer 2 beta homolog.	0.822
HNRNPA2B1	EIF4A3	ENSPTRP00000032472	ENSPTRP00000063644	Heterogeneous nuclear ribonucleoprotein A2/B1.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.570
HNRNPA2B1	RBM8A	ENSPTRP00000032472	ENSPTRP00000002050	Heterogeneous nuclear ribonucleoprotein A2/B1.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.443
HNRNPA2B1	SRSF1	ENSPTRP00000032472	ENSPTRP00000090781	Heterogeneous nuclear ribonucleoprotein A2/B1.	Serine and arginine rich splicing factor 1.	0.920
HNRNPA2B1	SRSF2	ENSPTRP00000032472	ENSPTRP00000043428	Heterogeneous nuclear ribonucleoprotein A2/B1.	Serine/arginine-rich splicing factor 2; Necessary for the splicing of pre-mRNA. It is required for formation of the earliest ATP-dependent splicing complex and interacts with spliceosomal components bound to both the 5'- and 3'-splice sites during spliceosome assembly. It also is required for ATP-dependent interactions of both U1 and U2 snRNPs with pre-mRNA. Interacts with other spliceosomal components, via the RS domains, to form a bridge between the 5'- and 3'-splice site binding components, U1 snRNP and U2AF. Binds to purine-rich RNA sequences, either 5'-AGSAGAGTA-3' (S=C or G) or 5 [...]	0.814
HNRNPA2B1	SRSF3	ENSPTRP00000032472	ENSPTRP00000069080	Heterogeneous nuclear ribonucleoprotein A2/B1.	Serine and arginine rich splicing factor 3.	0.903
HNRNPA2B1	SRSF7	ENSPTRP00000032472	ENSPTRP00000020349	Heterogeneous nuclear ribonucleoprotein A2/B1.	Serine and arginine rich splicing factor 7.	0.847
HNRNPA2B1	TRA2B	ENSPTRP00000032472	ENSPTRP00000027026	Heterogeneous nuclear ribonucleoprotein A2/B1.	Transformer 2 beta homolog.	0.910
MAGOH	EIF4A3	ENSPTRP00000001289	ENSPTRP00000063644	Mago-nashi homolog, proliferation-associated.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.991
MAGOH	NXF1	ENSPTRP00000001289	ENSPTRP00000006511	Mago-nashi homolog, proliferation-associated.	Nuclear RNA export factor 1.	0.611
MAGOH	RBM8A	ENSPTRP00000001289	ENSPTRP00000002050	Mago-nashi homolog, proliferation-associated.	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.	0.999
MAGOH	SRSF1	ENSPTRP00000001289	ENSPTRP00000090781	Mago-nashi homolog, proliferation-associated.	Serine and arginine rich splicing factor 1.	0.973