STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104001982MDP1 isoform 1. (105 aa)    
Predicted Functional Partners:
PDCD6IP
Programmed cell death 6 interacting protein.
    
 0.808
CHMP3
Charged multivesicular body protein 3 isoform X1.
    
 0.771
VPS4A
Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.
    
 0.759
CHMP2B
Charged multivesicular body protein 2B.
    
 0.677
VPS4B
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
    
 0.664
SYT17
Synaptotagmin 17.
    
   0.633
CHMP2A
Charged multivesicular body protein 2A.
   
 0.626
PTPN23
Protein tyrosine phosphatase, non-receptor type 23.
    
 0.624
CHMP4C
Charged multivesicular body protein 4C.
   
  0.607
CHMP1A
CHMP1A isoform 6.
   
 0.603
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.