STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104001982MDP1 isoform 1. (105 aa)    
Predicted Functional Partners:
PTPN23
Protein tyrosine phosphatase, non-receptor type 23.
    
 0.753
PDCD6IP
Programmed cell death 6 interacting protein.
    
 0.736
SLC5A8
Solute carrier family 5 member 8; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
   
    0.566
VPS4A
Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.
    
 0.542
MDP1
Magnesium-dependent phosphatase 1.
  
     0.505
CHMP3
Charged multivesicular body protein 3 isoform X1.
    
 0.489
CHMP2A
Charged multivesicular body protein 2A.
     
 0.474
CK820_G0048024
CHMP6 isoform 1.
     
 0.474
CHMP2B
Charged multivesicular body protein 2B.
     
 0.468
VPS4B
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
    
 0.465
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.