Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
USH2AUSH2A isoform 2. (5202 aa)    
Predicted Functional Partners:
USH1C
USH1C isoform 4.
    
 
 0.916
WHRN
WHRN isoform 2.
    
 0.912
CLRN1
T0022075 isoform 1.
      
 0.862
PDZD7
PDZD7 isoform 1.
    
 0.852
CDH23
CDH23 isoform 1.
   
 
 0.847
CLIC5
Chloride intracellular channel protein; Belongs to the chloride channel CLIC family.
      
 0.843
USH1G
USH1 protein network component sans.
   
 0.838
ATP8A2
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
   
 
 0.831
MYO7A
MYO7A isoform 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.823
COL10A1
Collagen type X alpha 1 chain.
   
 0.819
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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