STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBFOX2RNA binding fox-1 homolog 2. (451 aa)    
Predicted Functional Partners:
HNRNPF
Heterogeneous nuclear ribonucleoprotein F.
    
 0.946
QKI
QKI, KH domain containing RNA binding.
   
 
 0.913
RBPMS
RNA binding protein, mRNA processing factor.
   
 
 0.891
CK820_G0044510
HNRNPH1 isoform 48.
    
 0.839
HNRNPH1
HNRNPH1 isoform 31.
    
 0.839
PCBP4
Poly(rC) binding protein 4.
    
 
 0.778
RBPMS2
RNA binding protein, mRNA processing factor 2.
   
 
 0.746
ENSPTRP00000062975
annotation not available
    
 0.738
RBM8A
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
      
 0.735
ATXN1
ATXN1 isoform 2.
    
 
 0.713
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.