STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPG7Spastic paraplegia 7 (Pure and complicated autosomal recessive). (787 aa)    
Predicted Functional Partners:
AFG3L2
AFG3 like matrix AAA peptidase subunit 2.
  
 
0.943
MAIP1
Matrix AAA peptidase interacting protein 1.
    
 0.886
CSPG5
Chondroitin sulfate proteoglycan 5.
      
 0.844
PHB2
Prohibitin.
   
 0.838
TRIM41
Tripartite motif containing 41.
   
    0.821
PPIF
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.798
MRPL27
Mitochondrial ribosomal protein L27.
  
 
 0.770
MRPL13
Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.769
MRPS14
Mitochondrial ribosomal protein S14.
   
 
 0.767
MRPS12
Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.766
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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