STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC737549Battenin. (418 aa)    
Predicted Functional Partners:
CLN5
CLN5 intracellular trafficking protein.
    
 
 0.693
PPT1
Palmitoyl-protein thioesterase 1.
    
 
 0.677
CLN6
CLN6 isoform 13.
      
 0.666
MFSD8
Major facilitator superfamily domain containing 8.
    
 
 0.661
CLN8
Ceroid-lipofuscinosis neuronal protein 8.
      
 0.661
HOOK1
Hook microtubule tethering protein 1.
    
 
 0.658
KCNIP3
Potassium voltage-gated channel interacting protein 3.
    
 
 0.597
TPP1
Tripeptidyl-peptidase 1; Lysosomal serine protease with tripeptidyl-peptidase I activity. May act as a non-specific lysosomal peptidase which generates tripeptides from the breakdown products produced by lysosomal proteinases. Requires substrates with an unsubstituted N-terminus (By similarity).
      
 0.592
LOC100613849
Uncharacterized LOC100613849.
   
 
 0.547
DNAJC5
DnaJ heat shock protein family (Hsp40) member C5.
   
 
 0.547
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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