| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ATL3 | REEP5 | ENSPTRP00000078069 | ENSPTRP00000085226 | Atlastin GTPase 3. | Receptor expression-enhancing protein. | 0.687 |
| ATL3 | REEP6 | ENSPTRP00000078069 | ENSPTRP00000072819 | Atlastin GTPase 3. | Receptor expression-enhancing protein. | 0.441 |
| ATL3 | RTN3 | ENSPTRP00000078069 | ENSPTRP00000063222 | Atlastin GTPase 3. | Reticulon. | 0.751 |
| ATL3 | RTN3-2 | ENSPTRP00000078069 | ENSPTRP00000070736 | Atlastin GTPase 3. | Reticulon. | 0.751 |
| ATL3 | RTN4 | ENSPTRP00000078069 | ENSPTRP00000054695 | Atlastin GTPase 3. | Reticulon. | 0.900 |
| BACE1 | BACE2 | ENSPTRP00000007415 | ENSPTRP00000042556 | Beta-site APP-cleaving enzyme 1; Belongs to the peptidase A1 family. | Beta-site APP-cleaving enzyme 2; Belongs to the peptidase A1 family. | 0.905 |
| BACE1 | RTN3 | ENSPTRP00000007415 | ENSPTRP00000063222 | Beta-site APP-cleaving enzyme 1; Belongs to the peptidase A1 family. | Reticulon. | 0.946 |
| BACE1 | RTN3-2 | ENSPTRP00000007415 | ENSPTRP00000070736 | Beta-site APP-cleaving enzyme 1; Belongs to the peptidase A1 family. | Reticulon. | 0.946 |
| BACE1 | RTN4 | ENSPTRP00000007415 | ENSPTRP00000054695 | Beta-site APP-cleaving enzyme 1; Belongs to the peptidase A1 family. | Reticulon. | 0.948 |
| BACE2 | BACE1 | ENSPTRP00000042556 | ENSPTRP00000007415 | Beta-site APP-cleaving enzyme 2; Belongs to the peptidase A1 family. | Beta-site APP-cleaving enzyme 1; Belongs to the peptidase A1 family. | 0.905 |
| BACE2 | RTN3 | ENSPTRP00000042556 | ENSPTRP00000063222 | Beta-site APP-cleaving enzyme 2; Belongs to the peptidase A1 family. | Reticulon. | 0.935 |
| BACE2 | RTN3-2 | ENSPTRP00000042556 | ENSPTRP00000070736 | Beta-site APP-cleaving enzyme 2; Belongs to the peptidase A1 family. | Reticulon. | 0.935 |
| BACE2 | RTN4 | ENSPTRP00000042556 | ENSPTRP00000054695 | Beta-site APP-cleaving enzyme 2; Belongs to the peptidase A1 family. | Reticulon. | 0.940 |
| GABARAP | RTN3 | ENSPTRP00000014784 | ENSPTRP00000063222 | GABA type A receptor-associated protein. | Reticulon. | 0.690 |
| GABARAP | RTN3-2 | ENSPTRP00000014784 | ENSPTRP00000070736 | GABA type A receptor-associated protein. | Reticulon. | 0.560 |
| LINGO1 | RTN3 | ENSPTRP00000051339 | ENSPTRP00000063222 | Leucine rich repeat and Ig domain containing 1. | Reticulon. | 0.664 |
| LINGO1 | RTN3-2 | ENSPTRP00000051339 | ENSPTRP00000070736 | Leucine rich repeat and Ig domain containing 1. | Reticulon. | 0.664 |
| LINGO1 | RTN4 | ENSPTRP00000051339 | ENSPTRP00000054695 | Leucine rich repeat and Ig domain containing 1. | Reticulon. | 0.896 |
| PTPN9 | RTN3 | ENSPTRP00000012491 | ENSPTRP00000063222 | Protein tyrosine phosphatase, non-receptor type 9. | Reticulon. | 0.634 |
| PTPN9 | RTN3-2 | ENSPTRP00000012491 | ENSPTRP00000070736 | Protein tyrosine phosphatase, non-receptor type 9. | Reticulon. | 0.634 |
