Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SNX16Sorting nexin-16. (344 aa)    
Predicted Functional Partners:
PFKFB3
6-phosphofructo-2-kinase/fructose-2, 6-biphosphatase 3.
      
 0.818
NAALAD2
N-acetylated alpha-linked acidic dipeptidase 2.
    
 
 0.817
ALS2CL
ALS2 C-terminal like.
     
 0.814
ACVRL1
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.772
SNX1
Sorting nexin 1.
      
 0.693
RGS20
RGS20 isoform 1.
     
 0.688
KIF6
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
  0.637
PALM
PALM isoform 3.
    
   0.622
MMP8
Matrix metallopeptidase 8.
      
 0.613
SNX9
Sorting nexin.
      
 0.603
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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