STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM66Tripartite motif containing 66. (1245 aa)    
Predicted Functional Partners:
H3-4
HIST3H3 isoform 1.
    
 
 0.830
LOC112209457-4
Histone H3.1.
    
 
 0.727
LOC471875
Histone H3.1-like.
    
 
 0.727
HIST1H3A
H3F3B isoform 13.
    
 
 0.696
H3F3B
H3 histone family member 3B.
    
 
 0.696
CBX3
Chromobox homolog 3.
    
 
 0.646
CK820_G0034653
CBX3 isoform 2.
    
 
 0.646
H3C13
HIST2H3A isoform 1.
    
   0.621
LOC746430
Uncharacterized LOC746430.
    
   0.621
LOC107966300
Histone H3.
    
   0.621
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.