MID1 protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

MID1

MID1 isoform 1. (663 aa)

Predicted Functional Partners:

IGBP1

0.936

ENSPTRP00000073227

0.833

ENSPTRP00000061118

0.795

UBE2D3

0.795

MID2

0.784

ENSPTRP00000089974

0.784

ENSPTRP00000029492

0.766

PPP2CA

0.766

UBE2E2

0.726

PTPA-2

0.693

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPTRP00000029492	ENSPTRP00000073227	ENSPTRP00000029492	ENSPTRP00000073227	annotation not available	annotation not available	0.753
ENSPTRP00000029492	IGBP1	ENSPTRP00000029492	ENSPTRP00000037788	annotation not available	Immunoglobulin binding protein 1.	0.834
ENSPTRP00000029492	MID1	ENSPTRP00000029492	ENSPTRP00000077555	annotation not available	MID1 isoform 1.	0.766
ENSPTRP00000029492	PTPA-2	ENSPTRP00000029492	ENSPTRP00000068868	annotation not available	Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.	0.770
ENSPTRP00000061118	ENSPTRP00000089974	ENSPTRP00000061118	ENSPTRP00000089974	annotation not available	annotation not available	0.551
ENSPTRP00000061118	MID1	ENSPTRP00000061118	ENSPTRP00000077555	annotation not available	MID1 isoform 1.	0.795
ENSPTRP00000061118	MID2	ENSPTRP00000061118	ENSPTRP00000041384	annotation not available	MID2 isoform 1.	0.551
ENSPTRP00000073227	ENSPTRP00000029492	ENSPTRP00000073227	ENSPTRP00000029492	annotation not available	annotation not available	0.753
ENSPTRP00000073227	ENSPTRP00000089974	ENSPTRP00000073227	ENSPTRP00000089974	annotation not available	annotation not available	0.704
ENSPTRP00000073227	MID1	ENSPTRP00000073227	ENSPTRP00000077555	annotation not available	MID1 isoform 1.	0.833
ENSPTRP00000073227	MID2	ENSPTRP00000073227	ENSPTRP00000041384	annotation not available	MID2 isoform 1.	0.704
ENSPTRP00000073227	PPP2CA	ENSPTRP00000073227	ENSPTRP00000063523	annotation not available	PPP2CB isoform 8.	0.753
ENSPTRP00000073227	PTPA-2	ENSPTRP00000073227	ENSPTRP00000068868	annotation not available	Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.	0.634
ENSPTRP00000089974	ENSPTRP00000061118	ENSPTRP00000089974	ENSPTRP00000061118	annotation not available	annotation not available	0.551
ENSPTRP00000089974	ENSPTRP00000073227	ENSPTRP00000089974	ENSPTRP00000073227	annotation not available	annotation not available	0.704
ENSPTRP00000089974	IGBP1	ENSPTRP00000089974	ENSPTRP00000037788	annotation not available	Immunoglobulin binding protein 1.	0.803
ENSPTRP00000089974	MID1	ENSPTRP00000089974	ENSPTRP00000077555	annotation not available	MID1 isoform 1.	0.784
ENSPTRP00000089974	PTPA-2	ENSPTRP00000089974	ENSPTRP00000068868	annotation not available	Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.	0.480
ENSPTRP00000089974	UBE2D3	ENSPTRP00000089974	ENSPTRP00000073880	annotation not available	Ubiquitin conjugating enzyme E2 D3; Belongs to the ubiquitin-conjugating enzyme family.	0.551
IGBP1	ENSPTRP00000029492	ENSPTRP00000037788	ENSPTRP00000029492	Immunoglobulin binding protein 1.	annotation not available	0.834