STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIPR1EARP complex and GARP complex interacting protein 1. (414 aa)    
Predicted Functional Partners:
VPS50
VPS50 subunit of EARP/GARPII complex.
    
 0.921
VPS54
Vacuolar protein sorting 54 homolog.
    
 0.919
VPS53
Vacuolar protein sorting 53 homolog.
    
 0.910
ENSPTRP00000061796
annotation not available
   
 0.885
VPS51
Chromosome 11 open reading frame 2.
   
 0.885
VPS52
Vacuolar protein sorting 52 homolog.
    
 0.858
CCDC186
Chromosome 10 open reading frame 118.
      
 0.461
TRIM23
Tripartite motif containing 23.
    
 
 0.419
DTNBP1
Dystrobrevin binding protein 1.
    
 
 0.412
BAIAP3
BAIAP3 isoform 4.
      
 0.402
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.