Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GNS | IDS | ENSPTRP00000066176 | ENSPTRP00000085587 | GNS isoform 3. | T0188098 isoform 1. | 0.568 |
GNS | MED10 | ENSPTRP00000066176 | ENSPTRP00000028675 | GNS isoform 3. | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.435 |
GNS | MED14 | ENSPTRP00000066176 | ENSPTRP00000088140 | GNS isoform 3. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.494 |
GNS | MED17 | ENSPTRP00000066176 | ENSPTRP00000071124 | GNS isoform 3. | Mediator of RNA polymerase II transcription subunit 17 isoform X1. | 0.501 |
GNS | MED31 | ENSPTRP00000066176 | ENSPTRP00000014753 | GNS isoform 3. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.474 |
GNS | MED6 | ENSPTRP00000066176 | ENSPTRP00000083946 | GNS isoform 3. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.497 |
GNS | MED7 | ENSPTRP00000066176 | ENSPTRP00000029827 | GNS isoform 3. | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | 0.488 |
GNS | SUMF1 | ENSPTRP00000066176 | ENSPTRP00000070783 | GNS isoform 3. | Sulfatase modifying factor 1. | 0.610 |
HPSE2 | IDS | ENSPTRP00000004961 | ENSPTRP00000085587 | Heparanase 2 (inactive). | T0188098 isoform 1. | 0.900 |
IDS | GNS | ENSPTRP00000085587 | ENSPTRP00000066176 | T0188098 isoform 1. | GNS isoform 3. | 0.568 |
IDS | HPSE2 | ENSPTRP00000085587 | ENSPTRP00000004961 | T0188098 isoform 1. | Heparanase 2 (inactive). | 0.900 |
IDS | IDUA | ENSPTRP00000085587 | ENSPTRP00000027243 | T0188098 isoform 1. | IDUA isoform 1. | 0.944 |
IDS | MED10 | ENSPTRP00000085587 | ENSPTRP00000028675 | T0188098 isoform 1. | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.483 |
IDS | MED14 | ENSPTRP00000085587 | ENSPTRP00000088140 | T0188098 isoform 1. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.518 |
IDS | MED17 | ENSPTRP00000085587 | ENSPTRP00000071124 | T0188098 isoform 1. | Mediator of RNA polymerase II transcription subunit 17 isoform X1. | 0.516 |
IDS | MED31 | ENSPTRP00000085587 | ENSPTRP00000014753 | T0188098 isoform 1. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.491 |
IDS | MED6 | ENSPTRP00000085587 | ENSPTRP00000083946 | T0188098 isoform 1. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.520 |
IDS | MED7 | ENSPTRP00000085587 | ENSPTRP00000029827 | T0188098 isoform 1. | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | 0.516 |
IDS | SUMF1 | ENSPTRP00000085587 | ENSPTRP00000070783 | T0188098 isoform 1. | Sulfatase modifying factor 1. | 0.660 |
IDUA | IDS | ENSPTRP00000027243 | ENSPTRP00000085587 | IDUA isoform 1. | T0188098 isoform 1. | 0.944 |
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