TBCD protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARL2	TBCB	ENSPTRP00000058328	ENSPTRP00000018649	ARL2-SNX15 isoform 1; Belongs to the small GTPase superfamily. Arf family.	Tubulin folding cofactor B.	0.848
ARL2	TBCC	ENSPTRP00000058328	ENSPTRP00000031050	ARL2-SNX15 isoform 1; Belongs to the small GTPase superfamily. Arf family.	Tubulin folding cofactor C.	0.831
ARL2	TBCD	ENSPTRP00000058328	ENSPTRP00000086064	ARL2-SNX15 isoform 1; Belongs to the small GTPase superfamily. Arf family.	TBCD isoform 2.	0.957
ARL2	TBCE	ENSPTRP00000058328	ENSPTRP00000060023	ARL2-SNX15 isoform 1; Belongs to the small GTPase superfamily. Arf family.	TBCE isoform 2.	0.842
ARL2	TUBA1A	ENSPTRP00000058328	ENSPTRP00000008374	ARL2-SNX15 isoform 1; Belongs to the small GTPase superfamily. Arf family.	Detyrosinated tubulin alpha-1A chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (By similarity).	0.608
ARL2	TUBA1B	ENSPTRP00000058328	ENSPTRP00000065915	ARL2-SNX15 isoform 1; Belongs to the small GTPase superfamily. Arf family.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.599
ARL2	TUBA1C	ENSPTRP00000058328	ENSPTRP00000071873	ARL2-SNX15 isoform 1; Belongs to the small GTPase superfamily. Arf family.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.608
ARL2	TUBA4A	ENSPTRP00000058328	ENSPTRP00000022120	ARL2-SNX15 isoform 1; Belongs to the small GTPase superfamily. Arf family.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.608
PIK3CD	TBCD	ENSPTRP00000000229	ENSPTRP00000086064	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	TBCD isoform 2.	0.805
PIK3CD	WNT9A	ENSPTRP00000000229	ENSPTRP00000003483	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.743
TBCB	ARL2	ENSPTRP00000018649	ENSPTRP00000058328	Tubulin folding cofactor B.	ARL2-SNX15 isoform 1; Belongs to the small GTPase superfamily. Arf family.	0.848
TBCB	TBCC	ENSPTRP00000018649	ENSPTRP00000031050	Tubulin folding cofactor B.	Tubulin folding cofactor C.	0.615
TBCB	TBCD	ENSPTRP00000018649	ENSPTRP00000086064	Tubulin folding cofactor B.	TBCD isoform 2.	0.894
TBCB	TBCE	ENSPTRP00000018649	ENSPTRP00000060023	Tubulin folding cofactor B.	TBCE isoform 2.	0.891
TBCB	TUBA1A	ENSPTRP00000018649	ENSPTRP00000008374	Tubulin folding cofactor B.	Detyrosinated tubulin alpha-1A chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (By similarity).	0.529
TBCB	TUBA1B	ENSPTRP00000018649	ENSPTRP00000065915	Tubulin folding cofactor B.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.532
TBCB	TUBA1C	ENSPTRP00000018649	ENSPTRP00000071873	Tubulin folding cofactor B.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.502
TBCB	TUBA4A	ENSPTRP00000018649	ENSPTRP00000022120	Tubulin folding cofactor B.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.512
TBCC	ARL2	ENSPTRP00000031050	ENSPTRP00000058328	Tubulin folding cofactor C.	ARL2-SNX15 isoform 1; Belongs to the small GTPase superfamily. Arf family.	0.831
TBCC	TBCB	ENSPTRP00000031050	ENSPTRP00000018649	Tubulin folding cofactor C.	Tubulin folding cofactor B.	0.615