RGS8 protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

Export your current network:

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same PNG format, but at higher resolution

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GNAI1	GNAI2	ENSPTRP00000071974	ENSPTRP00000025802	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2.	0.999
GNAI1	GNAI3	ENSPTRP00000071974	ENSPTRP00000001821	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	0.999
GNAI1	GNAO1	ENSPTRP00000071974	ENSPTRP00000088044	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1.	G protein subunit alpha o1.	0.894
GNAI1	GNAT2	ENSPTRP00000071974	ENSPTRP00000001822	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1.	G protein subunit alpha transducin 2.	0.723
GNAI1	GNAT3	ENSPTRP00000071974	ENSPTRP00000055752	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1.	G protein subunit alpha transducin 3.	0.764
GNAI1	GNAZ	ENSPTRP00000071974	ENSPTRP00000024336	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1.	G protein subunit alpha z.	0.406
GNAI1	RGS8	ENSPTRP00000071974	ENSPTRP00000090369	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1.	Regulator of G protein signaling 8.	0.765
GNAI2	GNAI1	ENSPTRP00000025802	ENSPTRP00000071974	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1.	0.999
GNAI2	GNAI3	ENSPTRP00000025802	ENSPTRP00000001821	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	0.999
GNAI2	GNAO1	ENSPTRP00000025802	ENSPTRP00000088044	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2.	G protein subunit alpha o1.	0.972
GNAI2	GNAT2	ENSPTRP00000025802	ENSPTRP00000001822	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2.	G protein subunit alpha transducin 2.	0.948
GNAI2	GNAT3	ENSPTRP00000025802	ENSPTRP00000055752	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2.	G protein subunit alpha transducin 3.	0.966
GNAI2	GNAZ	ENSPTRP00000025802	ENSPTRP00000024336	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2.	G protein subunit alpha z.	0.907
GNAI2	RGS8	ENSPTRP00000025802	ENSPTRP00000090369	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2.	Regulator of G protein signaling 8.	0.739
GNAI3	GNAI1	ENSPTRP00000001821	ENSPTRP00000071974	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1.	0.999
GNAI3	GNAI2	ENSPTRP00000001821	ENSPTRP00000025802	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2.	0.999
GNAI3	GNAO1	ENSPTRP00000001821	ENSPTRP00000088044	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	G protein subunit alpha o1.	0.981
GNAI3	GNAT2	ENSPTRP00000001821	ENSPTRP00000001822	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	G protein subunit alpha transducin 2.	0.961
GNAI3	GNAT3	ENSPTRP00000001821	ENSPTRP00000055752	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	G protein subunit alpha transducin 3.	0.959
GNAI3	GNAZ	ENSPTRP00000001821	ENSPTRP00000024336	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	G protein subunit alpha z.	0.907