FAM83B protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANLN	CSNK1A1	ENSPTRP00000032604	ENSPTRP00000065625	Anillin, actin binding protein.	Casein kinase 1, alpha 1; Belongs to the protein kinase superfamily.	0.573
ANLN	CSNK1D	ENSPTRP00000032604	ENSPTRP00000066242	Anillin, actin binding protein.	Casein kinase 1 delta; Belongs to the protein kinase superfamily.	0.577
ANLN	ENSPTRP00000083999	ENSPTRP00000032604	ENSPTRP00000083999	Anillin, actin binding protein.	annotation not available	0.494
ANLN	FAM83B	ENSPTRP00000032604	ENSPTRP00000092139	Anillin, actin binding protein.	Family with sequence similarity 83 member B.	0.662
CCDC6	FAM83B	ENSPTRP00000039794	ENSPTRP00000092139	Coiled-coil domain containing 6.	Family with sequence similarity 83 member B.	0.608
CSNK1A1	ANLN	ENSPTRP00000065625	ENSPTRP00000032604	Casein kinase 1, alpha 1; Belongs to the protein kinase superfamily.	Anillin, actin binding protein.	0.573
CSNK1A1	CSNK1A1L	ENSPTRP00000065625	ENSPTRP00000060040	Casein kinase 1, alpha 1; Belongs to the protein kinase superfamily.	Casein kinase 1 alpha 1 like; Belongs to the protein kinase superfamily.	0.996
CSNK1A1	CSNK1D	ENSPTRP00000065625	ENSPTRP00000066242	Casein kinase 1, alpha 1; Belongs to the protein kinase superfamily.	Casein kinase 1 delta; Belongs to the protein kinase superfamily.	0.814
CSNK1A1	CSNK1E	ENSPTRP00000065625	ENSPTRP00000090203	Casein kinase 1, alpha 1; Belongs to the protein kinase superfamily.	Casein kinase 1, epsilon; Belongs to the protein kinase superfamily.	0.762
CSNK1A1	FAM83B	ENSPTRP00000065625	ENSPTRP00000092139	Casein kinase 1, alpha 1; Belongs to the protein kinase superfamily.	Family with sequence similarity 83 member B.	0.810
CSNK1A1L	CSNK1A1	ENSPTRP00000060040	ENSPTRP00000065625	Casein kinase 1 alpha 1 like; Belongs to the protein kinase superfamily.	Casein kinase 1, alpha 1; Belongs to the protein kinase superfamily.	0.996
CSNK1A1L	CSNK1D	ENSPTRP00000060040	ENSPTRP00000066242	Casein kinase 1 alpha 1 like; Belongs to the protein kinase superfamily.	Casein kinase 1 delta; Belongs to the protein kinase superfamily.	0.705
CSNK1A1L	CSNK1E	ENSPTRP00000060040	ENSPTRP00000090203	Casein kinase 1 alpha 1 like; Belongs to the protein kinase superfamily.	Casein kinase 1, epsilon; Belongs to the protein kinase superfamily.	0.620
CSNK1A1L	ENSPTRP00000083999	ENSPTRP00000060040	ENSPTRP00000083999	Casein kinase 1 alpha 1 like; Belongs to the protein kinase superfamily.	annotation not available	0.951
CSNK1A1L	FAM83B	ENSPTRP00000060040	ENSPTRP00000092139	Casein kinase 1 alpha 1 like; Belongs to the protein kinase superfamily.	Family with sequence similarity 83 member B.	0.615
CSNK1D	ANLN	ENSPTRP00000066242	ENSPTRP00000032604	Casein kinase 1 delta; Belongs to the protein kinase superfamily.	Anillin, actin binding protein.	0.577
CSNK1D	CSNK1A1	ENSPTRP00000066242	ENSPTRP00000065625	Casein kinase 1 delta; Belongs to the protein kinase superfamily.	Casein kinase 1, alpha 1; Belongs to the protein kinase superfamily.	0.814
CSNK1D	CSNK1A1L	ENSPTRP00000066242	ENSPTRP00000060040	Casein kinase 1 delta; Belongs to the protein kinase superfamily.	Casein kinase 1 alpha 1 like; Belongs to the protein kinase superfamily.	0.705
CSNK1D	CSNK1E	ENSPTRP00000066242	ENSPTRP00000090203	Casein kinase 1 delta; Belongs to the protein kinase superfamily.	Casein kinase 1, epsilon; Belongs to the protein kinase superfamily.	0.963
CSNK1D	ENSPTRP00000083999	ENSPTRP00000066242	ENSPTRP00000083999	Casein kinase 1 delta; Belongs to the protein kinase superfamily.	annotation not available	0.769