NID1 protein (Pongo abelii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

NID1

NID1 isoform 1. (1209 aa)

Predicted Functional Partners:

NID2

0.982

LAMC1

0.981

HSPG2

0.915

ENSPPYP00000024273

0.915

LAMA4

0.855

FBLN1

0.809

MMP19

0.807

LAMA3

0.807

LAMB1

0.800

LAMB3

0.789

Your Current Organism:

Pongo abelii

NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPPYP00000024273	FBLN1	ENSPPYP00000024273	ENSPPYP00000013321	annotation not available	Fibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes.	0.481
ENSPPYP00000024273	LAMA3	ENSPPYP00000024273	ENSPPYP00000024242	annotation not available	LAMA3 isoform 1.	0.418
ENSPPYP00000024273	LAMB1	ENSPPYP00000024273	ENSPPYP00000020074	annotation not available	LAMB1 isoform 1.	0.440
ENSPPYP00000024273	LAMC1	ENSPPYP00000024273	ENSPPYP00000023671	annotation not available	LAMC1 isoform 1.	0.478
ENSPPYP00000024273	NID1	ENSPPYP00000024273	ENSPPYP00000000091	annotation not available	NID1 isoform 1.	0.915
ENSPPYP00000024273	NID2	ENSPPYP00000024273	ENSPPYP00000006607	annotation not available	NID2 isoform 1.	0.814
FBLN1	ENSPPYP00000024273	ENSPPYP00000013321	ENSPPYP00000024273	Fibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes.	annotation not available	0.481
FBLN1	HSPG2	ENSPPYP00000013321	ENSPPYP00000002034	Fibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes.	HSPG2 isoform 1.	0.481
FBLN1	LAMB1	ENSPPYP00000013321	ENSPPYP00000020074	Fibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes.	LAMB1 isoform 1.	0.402
FBLN1	NID1	ENSPPYP00000013321	ENSPPYP00000000091	Fibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes.	NID1 isoform 1.	0.809
FBLN1	NID2	ENSPPYP00000013321	ENSPPYP00000006607	Fibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes.	NID2 isoform 1.	0.691
HSPG2	FBLN1	ENSPPYP00000002034	ENSPPYP00000013321	HSPG2 isoform 1.	Fibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes.	0.481
HSPG2	LAMA3	ENSPPYP00000002034	ENSPPYP00000024242	HSPG2 isoform 1.	LAMA3 isoform 1.	0.418
HSPG2	LAMB1	ENSPPYP00000002034	ENSPPYP00000020074	HSPG2 isoform 1.	LAMB1 isoform 1.	0.440
HSPG2	LAMC1	ENSPPYP00000002034	ENSPPYP00000023671	HSPG2 isoform 1.	LAMC1 isoform 1.	0.478
HSPG2	NID1	ENSPPYP00000002034	ENSPPYP00000000091	HSPG2 isoform 1.	NID1 isoform 1.	0.915
HSPG2	NID2	ENSPPYP00000002034	ENSPPYP00000006607	HSPG2 isoform 1.	NID2 isoform 1.	0.814
LAMA3	ENSPPYP00000024273	ENSPPYP00000024242	ENSPPYP00000024273	LAMA3 isoform 1.	annotation not available	0.418
LAMA3	HSPG2	ENSPPYP00000024242	ENSPPYP00000002034	LAMA3 isoform 1.	HSPG2 isoform 1.	0.418
LAMA3	LAMB1	ENSPPYP00000024242	ENSPPYP00000020074	LAMA3 isoform 1.	LAMB1 isoform 1.	0.716