Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CGNCGN isoform 4. (1203 aa)    
Predicted Functional Partners:
TJP1
TJP1 isoform 1; Belongs to the MAGUK family.
   
 0.997
ARHGEF2
Rho/Rac guanine nucleotide exchange factor 2.
     
 0.972
CR201_G0051707
T0183294 isoform 1.
     
 0.956
GATA4
GATA binding protein 4.
     
 0.901
TJP3
TJP3 isoform 5; Belongs to the MAGUK family.
   
 0.847
F11R
F11R isoform 1.
   
 
 0.824
DAB2IP
DAB2IP isoform 2.
    
   0.796
YWHAE
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon; Belongs to the 14-3-3 family.
    
 
 0.791
TJP2
TJP2 isoform 3; Belongs to the MAGUK family.
   
 0.748
ENSPPYP00000019656
annotation not available
    
 
 0.700
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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