Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SETDB1SETDB1 isoform 4. (1291 aa)    
Predicted Functional Partners:
ATF7IP
ATF7IP isoform 6.
   
 0.995
TRIM28
TRIM28 isoform 3.
   
 0.944
H3-4
Histone H3; Belongs to the histone H3 family.
    
 0.920
ATF7IP2
Activating transcription factor 7 interacting protein 2.
   
 0.905
TASOR
FAM208A isoform 4.
   
 0.886
LOC100436122-8
Histone H3.1.
    
 0.848
TRIM33
Tripartite motif containing 33.
   
 0.846
TRIM24
TRIM24 isoform 1.
   
 0.846
MPHOSPH8
MPHOSPH8 isoform 1.
   
 0.820
ARL14EP
ADP ribosylation factor like GTPase 14 effector protein.
    
 
 0.819
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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