Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARNTARNT isoform 1. (789 aa)    
Predicted Functional Partners:
CR201_G0009767
HIF1A isoform 5.
   
0.999
EPAS1
Endothelial PAS domain protein 1.
   
0.998
AHR
T0067486 isoform 1.
   
0.992
EP300
EP300 isoform 1.
   
 0.966
NPAS4
Neuronal PAS domain protein 4.
    
 0.956
HIF3A
HIF3A isoform 1.
   
 0.940
SIM2
SIM2 isoform 2.
   
 
 0.937
CREBBP
CREBBP isoform 1.
   
 0.923
SIM1
SIM bHLH transcription factor 1.
   
 
 0.815
TRIP11
TRIP11 isoform 2.
    
 0.798
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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