Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTGFRNPTGFRN isoform 1. (842 aa)    
Predicted Functional Partners:
CD9
Tetraspanin.
    
 
 0.967
CR201_G0045814
Tetraspanin.
    
 
 0.966
CD151
Tetraspanin.
    
 
 0.812
PTGFR
Prostaglandin F receptor; Belongs to the G-protein coupled receptor 1 family.
      
 0.593
TSPAN11
Tetraspanin.
    
 
 0.578
GDAP2
GDAP2 isoform 1.
      
 0.552
TSPAN2
Tetraspanin.
    
 
 0.542
ENSPPYP00000024222
annotation not available
    
 
 0.542
OR2I1P
Putative olfactory receptor 2I1.
      
 0.513
WDR3
WDR3 isoform 1.
      
 0.509
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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