Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSBN1Round spermatid basic protein 1. (802 aa)    
Predicted Functional Partners:
RSBN1L
RSBN1L isoform 1.
   
   0.927
ENSPPYP00000023554
annotation not available
    
   0.736
DDX51
DDX51 isoform 1; Belongs to the DEAD box helicase family.
    
   0.706
PHTF1
Putative homeodomain transcription factor 1.
 
    
 0.675
RAD23A
RAD23A isoform 1.
      
 0.613
RBM27
LOW QUALITY PROTEIN: RNA-binding protein 27.
   
  
 0.612
TTF1
TTF1 isoform 1.
      
 0.605
THUMPD2
THUMPD2 isoform 1.
      
 0.595
SCAF4
SR-related CTD associated factor 4.
   
  
 0.580
PIFO
Primary cilia formation.
      
 0.574
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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