Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PIFOPrimary cilia formation. (191 aa)    
Predicted Functional Partners:
DENND2D
DENN domain containing 2D.
      
 0.668
SCAF4
SR-related CTD associated factor 4.
      
 0.628
THUMPD2
THUMPD2 isoform 1.
      
 0.628
RBM27
LOW QUALITY PROTEIN: RNA-binding protein 27.
      
 0.628
TXLNB
TXLNB isoform 1.
      
 0.620
RSBN1
Round spermatid basic protein 1.
      
 0.574
RSPH1
Radial spoke head component 1.
   
  
 0.553
STAM2
STAM2 isoform 1.
      
 0.534
PRLHR
Prolactin releasing hormone receptor; Belongs to the G-protein coupled receptor 1 family.
      
 0.527
CAPS
CAPS isoform 1.
   
  
 0.505
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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