PRPF38B protein (Pongo abelii) - STRING interaction network

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Score

PRPF38B

Pre-mRNA processing factor 38B. (546 aa)

Predicted Functional Partners:

PRPF38A

0.905

PNN

0.769

LUC7L3

0.740

ENSPPYP00000014590

0.740

SRSF11

0.737

LUC7L

0.711

RBM39

0.693

ZC3H18

0.645

SREK1

0.620

SCOC

0.615

Your Current Organism:

Pongo abelii

NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPPYP00000014590	LUC7L	ENSPPYP00000014590	ENSPPYP00000007814	annotation not available	LUC7L isoform 4.	0.655
ENSPPYP00000014590	PNN	ENSPPYP00000014590	ENSPPYP00000006552	annotation not available	Pinin; Transcriptional activator binding to the E-box 1 core sequence of the E-cadherin promoter gene; the core-binding sequence is 5'CAGGTG-3'. Capable of reversing CTBP1-mediated transcription repression. Auxiliary component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junction on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. Participates in the regulation [...]	0.800
ENSPPYP00000014590	PRPF38B	ENSPPYP00000014590	ENSPPYP00000001266	annotation not available	Pre-mRNA processing factor 38B.	0.740
ENSPPYP00000014590	RBM39	ENSPPYP00000014590	ENSPPYP00000012240	annotation not available	RNA-binding protein 39; Transcriptional coactivator for steroid nuclear receptors ESR1/ER-alpha and ESR2/ER-beta, and JUN/AP-1 (By similarity). May be involved in pre-mRNA splicing process.	0.838
ENSPPYP00000014590	SREK1	ENSPPYP00000014590	ENSPPYP00000017335	annotation not available	SREK1 isoform 1.	0.586
ENSPPYP00000014590	SRSF11	ENSPPYP00000014590	ENSPPYP00000001451	annotation not available	SRSF11 isoform 3.	0.754
LUC7L	ENSPPYP00000014590	ENSPPYP00000007814	ENSPPYP00000014590	LUC7L isoform 4.	annotation not available	0.655
LUC7L	LUC7L3	ENSPPYP00000007814	ENSPPYP00000009296	LUC7L isoform 4.	Luc7-like protein 3; Binds cAMP regulatory element DNA sequence. May play a role in RNA splicing (By similarity).	0.769
LUC7L	PNN	ENSPPYP00000007814	ENSPPYP00000006552	LUC7L isoform 4.	Pinin; Transcriptional activator binding to the E-box 1 core sequence of the E-cadherin promoter gene; the core-binding sequence is 5'CAGGTG-3'. Capable of reversing CTBP1-mediated transcription repression. Auxiliary component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junction on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. Participates in the regulation [...]	0.650
LUC7L	PRPF38B	ENSPPYP00000007814	ENSPPYP00000001266	LUC7L isoform 4.	Pre-mRNA processing factor 38B.	0.711
LUC7L	RBM39	ENSPPYP00000007814	ENSPPYP00000012240	LUC7L isoform 4.	RNA-binding protein 39; Transcriptional coactivator for steroid nuclear receptors ESR1/ER-alpha and ESR2/ER-beta, and JUN/AP-1 (By similarity). May be involved in pre-mRNA splicing process.	0.749
LUC7L	SREK1	ENSPPYP00000007814	ENSPPYP00000017335	LUC7L isoform 4.	SREK1 isoform 1.	0.453
LUC7L	SRSF11	ENSPPYP00000007814	ENSPPYP00000001451	LUC7L isoform 4.	SRSF11 isoform 3.	0.425
LUC7L	ZC3H18	ENSPPYP00000007814	ENSPPYP00000008616	LUC7L isoform 4.	ZC3H18 isoform 1.	0.658
LUC7L3	LUC7L	ENSPPYP00000009296	ENSPPYP00000007814	Luc7-like protein 3; Binds cAMP regulatory element DNA sequence. May play a role in RNA splicing (By similarity).	LUC7L isoform 4.	0.769
LUC7L3	PNN	ENSPPYP00000009296	ENSPPYP00000006552	Luc7-like protein 3; Binds cAMP regulatory element DNA sequence. May play a role in RNA splicing (By similarity).	Pinin; Transcriptional activator binding to the E-box 1 core sequence of the E-cadherin promoter gene; the core-binding sequence is 5'CAGGTG-3'. Capable of reversing CTBP1-mediated transcription repression. Auxiliary component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junction on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. Participates in the regulation [...]	0.800
LUC7L3	PRPF38B	ENSPPYP00000009296	ENSPPYP00000001266	Luc7-like protein 3; Binds cAMP regulatory element DNA sequence. May play a role in RNA splicing (By similarity).	Pre-mRNA processing factor 38B.	0.740
LUC7L3	RBM39	ENSPPYP00000009296	ENSPPYP00000012240	Luc7-like protein 3; Binds cAMP regulatory element DNA sequence. May play a role in RNA splicing (By similarity).	RNA-binding protein 39; Transcriptional coactivator for steroid nuclear receptors ESR1/ER-alpha and ESR2/ER-beta, and JUN/AP-1 (By similarity). May be involved in pre-mRNA splicing process.	0.838
LUC7L3	SREK1	ENSPPYP00000009296	ENSPPYP00000017335	Luc7-like protein 3; Binds cAMP regulatory element DNA sequence. May play a role in RNA splicing (By similarity).	SREK1 isoform 1.	0.586
LUC7L3	SRSF11	ENSPPYP00000009296	ENSPPYP00000001451	Luc7-like protein 3; Binds cAMP regulatory element DNA sequence. May play a role in RNA splicing (By similarity).	SRSF11 isoform 3.	0.754