Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC18Coiled-coil domain containing 18. (1454 aa)    
Predicted Functional Partners:
CCDC14
CCDC14 isoform 1.
   
 
 0.814
KIAA2026
KIAA2026 isoform 3.
      
 0.627
PRPF19
PRPF19 isoform 1.
    
 
 0.590
PCNT
PCNT isoform 1.
   
   0.567
PARPBP
PARPBP isoform 1.
   
  
 0.555
CCDC13
Coiled-coil domain-containing protein 13.
    
 
 0.543
CEP135
CEP135 isoform 2.
   
   0.516
SFXN4
SFXN4 isoform 1.
      
 0.509
DMRT2
Doublesex and mab-3 related transcription factor 2.
    
   0.491
CR201_G0049732
EXD3 isoform 5.
    
 
 0.491
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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