Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMO4LIM domain only 4. (165 aa)    
Predicted Functional Partners:
SSBP2
Single stranded DNA binding protein 2.
    
 
 0.918
LDB1
LIM domain binding 1.
   
 0.913
LDB2
LDB2 isoform 1.
   
 0.867
CR201_G0002293
RBBP8 isoform 3.
    
 
 0.830
ISL2
ISL LIM homeobox 2.
    
   0.788
CR201_G0037373
SSBP4 isoform 8.
    
 
 0.770
SSBP4
SSBP4 isoform 2.
    
 
 0.770
IDI1
Isopentenyl-diphosphate Delta-isomerase 1; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
    
   0.756
SSBP3
SSBP3 isoform 5.
    
 
 0.745
CR201_G0021063
SSBP3 isoform 8.
    
 
 0.745
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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