Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLCA1CLCA1 isoform 1. (914 aa)    
Predicted Functional Partners:
CLCA2
CLCA2 isoform 1.
  
  
 
0.928
CLCA4
CLCA4 isoform 1.
  
 
 
0.922
ZG16
Zymogen granule protein 16.
   
  
 0.890
FCGBP
FCGBP isoform 1.
   
 0.869
CHP2
Calcineurin like EF-hand protein 2.
   
  0.738
TFF3
TFF3 isoform 1.
   
 
 0.727
LIX1
Limb and CNS expressed 1.
   
  
 0.704
ITLN1
LOW QUALITY PROTEIN: intelectin-1.
   
 0.682
SERPINB2
SERPINB10 isoform 2; Belongs to the serpin family.
    
 0.647
CWC25
CWC25 spliceosome associated protein homolog.
   
    0.641
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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