Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLCA2CLCA2 isoform 1. (940 aa)    
Predicted Functional Partners:
CLCA4
CLCA4 isoform 1.
  
  
 
0.928
CLCA1
CLCA1 isoform 1.
  
  
 
0.928
AADACL2
AADACL2 isoform 2.
   
 
 0.895
SRRM4
SRRM4 isoform 1.
    
 0.893
COL10A1
Collagen type X alpha 1 chain.
    
 0.890
WFS1
WFS1 isoform 1.
    
 0.888
TMC1
Transmembrane channel-like protein.
   
  
 0.888
SLC52A3
Solute carrier family 52 member 3.
      
 0.887
STOX1
STOX1 isoform 1.
      
 0.886
OTOF
OTOF isoform 2.
     
 0.886
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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