Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC40Leucine-rich repeat-containing protein 40. (602 aa)    
Predicted Functional Partners:
CNPY3
Canopy FGF signaling regulator 3.
    
 0.874
KCTD3
Potassium channel tetramerization domain containing 3.
    
  0.792
MRI1
Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). Belongs to the eIF-2B alpha/beta/delta subunits family. MtnA subfamily.
    
   0.779
CNPY4
Canopy FGF signaling regulator 4.
    
 0.722
AAMDC
AAMDC isoform 7.
      
 0.624
ZC3H8
ZC3H8 isoform 1.
      
 0.623
TCAIM
TCAIM isoform 2.
   
  
 0.612
SPEF2
SPEF2 isoform 3.
    
 0.605
CR201_G0022879
CLEC2L isoform 1.
      
 0.605
SH3D21
SH3D21 isoform 3.
      
 0.603
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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