Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPPYP00000001461annotation not available (260 aa)    
Predicted Functional Partners:
HNRNPA2B1
Heterogeneous nuclear ribonucleoproteins A2/B1; Heterogeneous nuclear ribonucleoprotein (hnRNP) that associates with nascent pre-mRNAs, packaging them into hnRNP particles. The hnRNP particle arrangement on nascent hnRNA is non-random and sequence-dependent and serves to condense and stabilize the transcripts and minimize tangling and knotting. Packaging plays a role in various processes such as transcription, pre-mRNA processing, RNA nuclear export, subcellular location, mRNA translation and stability of mature mRNAs. Forms hnRNP particles with at least 20 other different hnRNP and he [...]
   
 0.970
HNRNPR
HNRNPR isoform 2.
   
 0.916
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
 0.909
HNRNPL
LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein L.
   
 0.902
HNRNPDL
Heterogeneous nuclear ribonucleoprotein D like.
   
 0.868
SRSF3
SRSF3 isoform 5.
   
 0.855
HNRNPU
HNRNPU isoform 9.
   
 0.849
PTBP1
PTBP1 isoform 4.
   
 0.848
HNRNPD
Heterogeneous nuclear ribonucleoprotein D.
   
 0.846
ENSPPYP00000022846
annotation not available
   
 0.846
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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