MYSM1 protein (Pongo abelii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

MYSM1

MYSM1 isoform 1. (829 aa)

Predicted Functional Partners:

CECR2

0.984

KAT2B

0.984

PSMD6

0.889

PSMD13

0.881

PSMD4

0.880

PSMA1

0.879

ZFAND4

0.876

PSMA3

0.876

PSMC3

0.874

PSMB2

0.872

Your Current Organism:

Pongo abelii

NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CECR2	MYSM1	ENSPPYP00000012895	ENSPPYP00000001512	CECR2 isoform 2.	MYSM1 isoform 1.	0.984
KAT2B	MYSM1	ENSPPYP00000015742	ENSPPYP00000001512	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.	MYSM1 isoform 1.	0.984
MYSM1	CECR2	ENSPPYP00000001512	ENSPPYP00000012895	MYSM1 isoform 1.	CECR2 isoform 2.	0.984
MYSM1	KAT2B	ENSPPYP00000001512	ENSPPYP00000015742	MYSM1 isoform 1.	Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.	0.984
MYSM1	PSMA1	ENSPPYP00000001512	ENSPPYP00000003979	MYSM1 isoform 1.	Proteasome subunit alpha type-1; Component of the 20S core proteasome complex involved in the proteolytic degradation of most intracellular proteins. This complex plays numerous essential roles within the cell by associating with different regulatory particles. Associated with two 19S regulatory particles, forms the 26S proteasome and thus participates in the ATP- dependent degradation of ubiquitinated proteins. The 26S proteasome plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins that could impair cellular functions, and by removing pr [...]	0.879
MYSM1	PSMA3	ENSPPYP00000001512	ENSPPYP00000006652	MYSM1 isoform 1.	Proteasome subunit alpha type.	0.876
MYSM1	PSMB2	ENSPPYP00000001512	ENSPPYP00000001793	MYSM1 isoform 1.	Proteasome subunit beta.	0.872
MYSM1	PSMC3	ENSPPYP00000001512	ENSPPYP00000003790	MYSM1 isoform 1.	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.	0.874
MYSM1	PSMD13	ENSPPYP00000001512	ENSPPYP00000022356	MYSM1 isoform 1.	PSMD13 isoform 6.	0.881
MYSM1	PSMD4	ENSPPYP00000001512	ENSPPYP00000024378	MYSM1 isoform 1.	PSMD4 isoform 1.	0.880
MYSM1	PSMD6	ENSPPYP00000001512	ENSPPYP00000015370	MYSM1 isoform 1.	Proteasome 26S subunit, non-ATPase 6.	0.889
MYSM1	ZFAND4	ENSPPYP00000001512	ENSPPYP00000002604	MYSM1 isoform 1.	Zinc finger AN1-type containing 4.	0.876
PSMA1	MYSM1	ENSPPYP00000003979	ENSPPYP00000001512	Proteasome subunit alpha type-1; Component of the 20S core proteasome complex involved in the proteolytic degradation of most intracellular proteins. This complex plays numerous essential roles within the cell by associating with different regulatory particles. Associated with two 19S regulatory particles, forms the 26S proteasome and thus participates in the ATP- dependent degradation of ubiquitinated proteins. The 26S proteasome plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins that could impair cellular functions, and by removing pr [...]	MYSM1 isoform 1.	0.879
PSMA1	PSMA3	ENSPPYP00000003979	ENSPPYP00000006652	Proteasome subunit alpha type-1; Component of the 20S core proteasome complex involved in the proteolytic degradation of most intracellular proteins. This complex plays numerous essential roles within the cell by associating with different regulatory particles. Associated with two 19S regulatory particles, forms the 26S proteasome and thus participates in the ATP- dependent degradation of ubiquitinated proteins. The 26S proteasome plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins that could impair cellular functions, and by removing pr [...]	Proteasome subunit alpha type.	0.999
PSMA1	PSMB2	ENSPPYP00000003979	ENSPPYP00000001793	Proteasome subunit alpha type-1; Component of the 20S core proteasome complex involved in the proteolytic degradation of most intracellular proteins. This complex plays numerous essential roles within the cell by associating with different regulatory particles. Associated with two 19S regulatory particles, forms the 26S proteasome and thus participates in the ATP- dependent degradation of ubiquitinated proteins. The 26S proteasome plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins that could impair cellular functions, and by removing pr [...]	Proteasome subunit beta.	0.999
PSMA1	PSMC3	ENSPPYP00000003979	ENSPPYP00000003790	Proteasome subunit alpha type-1; Component of the 20S core proteasome complex involved in the proteolytic degradation of most intracellular proteins. This complex plays numerous essential roles within the cell by associating with different regulatory particles. Associated with two 19S regulatory particles, forms the 26S proteasome and thus participates in the ATP- dependent degradation of ubiquitinated proteins. The 26S proteasome plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins that could impair cellular functions, and by removing pr [...]	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.	0.994
PSMA1	PSMD13	ENSPPYP00000003979	ENSPPYP00000022356	Proteasome subunit alpha type-1; Component of the 20S core proteasome complex involved in the proteolytic degradation of most intracellular proteins. This complex plays numerous essential roles within the cell by associating with different regulatory particles. Associated with two 19S regulatory particles, forms the 26S proteasome and thus participates in the ATP- dependent degradation of ubiquitinated proteins. The 26S proteasome plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins that could impair cellular functions, and by removing pr [...]	PSMD13 isoform 6.	0.994
PSMA1	PSMD4	ENSPPYP00000003979	ENSPPYP00000024378	Proteasome subunit alpha type-1; Component of the 20S core proteasome complex involved in the proteolytic degradation of most intracellular proteins. This complex plays numerous essential roles within the cell by associating with different regulatory particles. Associated with two 19S regulatory particles, forms the 26S proteasome and thus participates in the ATP- dependent degradation of ubiquitinated proteins. The 26S proteasome plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins that could impair cellular functions, and by removing pr [...]	PSMD4 isoform 1.	0.994
PSMA1	PSMD6	ENSPPYP00000003979	ENSPPYP00000015370	Proteasome subunit alpha type-1; Component of the 20S core proteasome complex involved in the proteolytic degradation of most intracellular proteins. This complex plays numerous essential roles within the cell by associating with different regulatory particles. Associated with two 19S regulatory particles, forms the 26S proteasome and thus participates in the ATP- dependent degradation of ubiquitinated proteins. The 26S proteasome plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins that could impair cellular functions, and by removing pr [...]	Proteasome 26S subunit, non-ATPase 6.	0.998
PSMA1	ZFAND4	ENSPPYP00000003979	ENSPPYP00000002604	Proteasome subunit alpha type-1; Component of the 20S core proteasome complex involved in the proteolytic degradation of most intracellular proteins. This complex plays numerous essential roles within the cell by associating with different regulatory particles. Associated with two 19S regulatory particles, forms the 26S proteasome and thus participates in the ATP- dependent degradation of ubiquitinated proteins. The 26S proteasome plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins that could impair cellular functions, and by removing pr [...]	Zinc finger AN1-type containing 4.	0.688