STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA6Spermatogenesis associated 6. (488 aa)    
Predicted Functional Partners:
MARCHF10
Membrane associated ring-CH-type finger 10.
      
 0.683
TSSK4
TSSK4 isoform 2; Belongs to the protein kinase superfamily.
      
 0.681
QRICH1
Glutamine rich 1.
      
 0.680
ROPN1
Rhophilin associated tail protein 1.
      
 0.678
CABYR
Calcium binding tyrosine phosphorylation regulated.
      
 0.678
CCDC39
CCDC39 isoform 3.
    
 
 0.616
CFAP43
CFAP43 isoform 1.
      
 0.584
DNAH1
DNAH1 isoform 1.
   
  
 0.571
AKAP4
AKAP4 isoform 1.
      
 0.569
CFAP44
CFAP44 isoform 3.
      
 0.567
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.