Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TAL1TAL1 isoform 1. (194 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
    
 0.990
LMO2
LMO2 isoform 1.
   
 0.982
GATA1
GATA1 isoform 1.
   
 0.979
TCF3
TCF3 isoform 5.
   
 0.977
TCF12
TCF12 isoform 1.
   
 0.971
TCF4
TCF4 isoform 16.
   
 0.964
GATA2
GATA2 isoform 1.
   
 0.957
GATA3
GATA binding protein 3.
   
 0.942
LDB2
LDB2 isoform 1.
    
 0.925
LMO1
LMO1 isoform 3.
    
 0.883
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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