Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RLFRLF isoform 1. (1855 aa)    
Predicted Functional Partners:
PARG
Poly(ADP-ribose) glycohydrolase.
   
   0.656
WBP1L
WW domain binding protein 1 like.
     
 0.634
COLCA2
COLCA2 isoform 4.
      
 0.633
KLHL7
Kelch like family member 7.
    
 0.551
UAP1
UAP1 isoform 1.
      
 0.523
MYCL
MYCL isoform 2.
    
 
 0.522
UFC1
Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.
      
 0.509
ASH1L
ASH1L isoform 2.
   
 0.502
C21orf91
Chromosome 21 open reading frame 91.
      
 0.467
RXFP4
RXFP4 isoform 1.
    
 
 0.448
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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