Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COL8A2COL8A2 isoform 1. (703 aa)    
Predicted Functional Partners:
COL8A1
Collagen type VIII alpha 1 chain.
   
 0.936
COL4A5
COL4A5 isoform 2.
    
 0.856
COLGALT2
COLGALT2 isoform 3.
    
 0.799
COL2A1
Collagen type II alpha 1 chain.
   
 0.768
SLC4A11
Solute carrier family 4 member 11.
      
 0.729
C2CD2
C2CD2 isoform 3.
      
 0.726
P4HA2
Prolyl 4-hydroxylase subunit alpha 2.
    
 0.681
COL4A3
COL4A3 isoform 1.
    
 0.644
COL7A1
COL7A1 isoform 1.
    
 0.644
CYYR1
CYYR1 isoform 1.
      
 0.626
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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