NCDN protein (Pongo abelii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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[Homology]

Score

NCDN

NCDN isoform 1. (729 aa)

Predicted Functional Partners:

GRM5

0.939

GRM1

0.929

AAR2

0.799

TTC27

0.794

EFTUD2

0.762

ECD

0.703

EAPP

0.637

AP3B2

0.605

MAPK8IP2

0.586

ENSPPYP00000015933

0.584

Your Current Organism:

Pongo abelii

NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AAR2	EAPP	ENSPPYP00000012249	ENSPPYP00000006517	Protein AAR2 homolog; Component of the U5 snRNP complex that is required for spliceosome assembly and for pre-mRNA splicing. Belongs to the AAR2 family.	E2F associated phosphoprotein.	0.938
AAR2	ECD	ENSPPYP00000012249	ENSPPYP00000002721	Protein AAR2 homolog; Component of the U5 snRNP complex that is required for spliceosome assembly and for pre-mRNA splicing. Belongs to the AAR2 family.	ECD isoform 6.	0.936
AAR2	EFTUD2	ENSPPYP00000012249	ENSPPYP00000009352	Protein AAR2 homolog; Component of the U5 snRNP complex that is required for spliceosome assembly and for pre-mRNA splicing. Belongs to the AAR2 family.	116 kDa U5 small nuclear ribonucleoprotein component; Required for pre-mRNA splicing as component of the spliceosome, including pre-catalytic, catalytic and post-catalytic spliceosomal complexes (By similarity). Component of the U5 snRNP and the U4/U6-U5 tri-snRNP complex, a building block of the spliceosome (By similarity).	0.968
AAR2	ENSPPYP00000015933	ENSPPYP00000012249	ENSPPYP00000015933	Protein AAR2 homolog; Component of the U5 snRNP complex that is required for spliceosome assembly and for pre-mRNA splicing. Belongs to the AAR2 family.	annotation not available	0.705
AAR2	NCDN	ENSPPYP00000012249	ENSPPYP00000001795	Protein AAR2 homolog; Component of the U5 snRNP complex that is required for spliceosome assembly and for pre-mRNA splicing. Belongs to the AAR2 family.	NCDN isoform 1.	0.799
AAR2	TTC27	ENSPPYP00000012249	ENSPPYP00000013964	Protein AAR2 homolog; Component of the U5 snRNP complex that is required for spliceosome assembly and for pre-mRNA splicing. Belongs to the AAR2 family.	Tetratricopeptide repeat protein 27; Belongs to the TTC27 family.	0.787
AP3B2	NCDN	ENSPPYP00000007802	ENSPPYP00000001795	AP-3 complex subunit beta.	NCDN isoform 1.	0.605
EAPP	AAR2	ENSPPYP00000006517	ENSPPYP00000012249	E2F associated phosphoprotein.	Protein AAR2 homolog; Component of the U5 snRNP complex that is required for spliceosome assembly and for pre-mRNA splicing. Belongs to the AAR2 family.	0.938
EAPP	ECD	ENSPPYP00000006517	ENSPPYP00000002721	E2F associated phosphoprotein.	ECD isoform 6.	0.915
EAPP	EFTUD2	ENSPPYP00000006517	ENSPPYP00000009352	E2F associated phosphoprotein.	116 kDa U5 small nuclear ribonucleoprotein component; Required for pre-mRNA splicing as component of the spliceosome, including pre-catalytic, catalytic and post-catalytic spliceosomal complexes (By similarity). Component of the U5 snRNP and the U4/U6-U5 tri-snRNP complex, a building block of the spliceosome (By similarity).	0.922
EAPP	NCDN	ENSPPYP00000006517	ENSPPYP00000001795	E2F associated phosphoprotein.	NCDN isoform 1.	0.637
EAPP	TTC27	ENSPPYP00000006517	ENSPPYP00000013964	E2F associated phosphoprotein.	Tetratricopeptide repeat protein 27; Belongs to the TTC27 family.	0.705
ECD	AAR2	ENSPPYP00000002721	ENSPPYP00000012249	ECD isoform 6.	Protein AAR2 homolog; Component of the U5 snRNP complex that is required for spliceosome assembly and for pre-mRNA splicing. Belongs to the AAR2 family.	0.936
ECD	EAPP	ENSPPYP00000002721	ENSPPYP00000006517	ECD isoform 6.	E2F associated phosphoprotein.	0.915
ECD	EFTUD2	ENSPPYP00000002721	ENSPPYP00000009352	ECD isoform 6.	116 kDa U5 small nuclear ribonucleoprotein component; Required for pre-mRNA splicing as component of the spliceosome, including pre-catalytic, catalytic and post-catalytic spliceosomal complexes (By similarity). Component of the U5 snRNP and the U4/U6-U5 tri-snRNP complex, a building block of the spliceosome (By similarity).	0.819
ECD	ENSPPYP00000015933	ENSPPYP00000002721	ENSPPYP00000015933	ECD isoform 6.	annotation not available	0.462
ECD	NCDN	ENSPPYP00000002721	ENSPPYP00000001795	ECD isoform 6.	NCDN isoform 1.	0.703
ECD	TTC27	ENSPPYP00000002721	ENSPPYP00000013964	ECD isoform 6.	Tetratricopeptide repeat protein 27; Belongs to the TTC27 family.	0.736
EFTUD2	AAR2	ENSPPYP00000009352	ENSPPYP00000012249	116 kDa U5 small nuclear ribonucleoprotein component; Required for pre-mRNA splicing as component of the spliceosome, including pre-catalytic, catalytic and post-catalytic spliceosomal complexes (By similarity). Component of the U5 snRNP and the U4/U6-U5 tri-snRNP complex, a building block of the spliceosome (By similarity).	Protein AAR2 homolog; Component of the U5 snRNP complex that is required for spliceosome assembly and for pre-mRNA splicing. Belongs to the AAR2 family.	0.968
EFTUD2	EAPP	ENSPPYP00000009352	ENSPPYP00000006517	116 kDa U5 small nuclear ribonucleoprotein component; Required for pre-mRNA splicing as component of the spliceosome, including pre-catalytic, catalytic and post-catalytic spliceosomal complexes (By similarity). Component of the U5 snRNP and the U4/U6-U5 tri-snRNP complex, a building block of the spliceosome (By similarity).	E2F associated phosphoprotein.	0.922