Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM54Transmembrane protein 54. (222 aa)    
Predicted Functional Partners:
BCO1
BCO1 isoform 1.
     
 0.658
ZCCHC24
Zinc finger CCHC-type containing 24.
      
 0.619
UNC79
UNC79 isoform 1.
    
 0.560
DLG5
DLG5 isoform 1; Belongs to the MAGUK family.
    
 
 0.538
STARD10
StAR related lipid transfer domain containing 10.
      
 0.534
TSPYL5
TSPYL5 isoform 1; Belongs to the nucleosome assembly protein (NAP) family.
    
 
 0.527
UACA
UACA isoform 2.
    
 0.510
GAL3ST1
GAL3ST1 isoform 1.
      
 0.508
AMER3
APC membrane recruitment protein 3.
      
 0.504
PLCH1
Phosphoinositide phospholipase C.
      
 0.494
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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