Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COL16A1COL16A1 isoform 1. (1578 aa)    
Predicted Functional Partners:
CR201_G0052020
COL6A2 isoform 4.
   
 0.749
COL11A1
COL11A1 isoform 4.
   
 0.744
FBN1
FBN1 isoform 1.
   
 0.653
EFEMP2
EFEMP2 isoform 1.
   
 0.617
LTBP2
LTBP2 isoform 2.
   
 0.612
COPZ2
Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.
      
 0.585
ITGA10
Integrin subunit alpha 10; Belongs to the integrin alpha chain family.
    
 0.574
MRGPRF
MRGPRF isoform 1; Belongs to the G-protein coupled receptor 1 family.
   
 
 0.560
COL5A3
COL5A3 isoform 1.
   
 0.517
COL8A1
Collagen type VIII alpha 1 chain.
   
 0.517
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.