RGR protein (Pongo abelii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pongo abelii

NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPPYP00000007387	ENSPPYP00000023356	ENSPPYP00000007387	ENSPPYP00000023356	annotation not available	Long/medium wavelength-sensitive opsin.	0.594
ENSPPYP00000007387	GNAT2	ENSPPYP00000007387	ENSPPYP00000001240	annotation not available	G protein subunit alpha transducin 2.	0.809
ENSPPYP00000007387	GNAT3	ENSPPYP00000007387	ENSPPYP00000020019	annotation not available	GNAT3 isoform 1.	0.809
ENSPPYP00000007387	GNG12	ENSPPYP00000007387	ENSPPYP00000001459	annotation not available	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.635
ENSPPYP00000007387	GNG3	ENSPPYP00000007387	ENSPPYP00000003639	annotation not available	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.761
ENSPPYP00000007387	GNGT2	ENSPPYP00000007387	ENSPPYP00000010004	annotation not available	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.746
ENSPPYP00000007387	OPN1SW	ENSPPYP00000007387	ENSPPYP00000020174	annotation not available	Opsin 1, short wave sensitive.	0.709
ENSPPYP00000007387	RGR	ENSPPYP00000007387	ENSPPYP00000002652	annotation not available	RGR isoform 1; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily.	0.841
ENSPPYP00000007387	RHO	ENSPPYP00000007387	ENSPPYP00000015003	annotation not available	Rhodopsin.	0.677
ENSPPYP00000023356	ENSPPYP00000007387	ENSPPYP00000023356	ENSPPYP00000007387	Long/medium wavelength-sensitive opsin.	annotation not available	0.594
ENSPPYP00000023356	GNAT2	ENSPPYP00000023356	ENSPPYP00000001240	Long/medium wavelength-sensitive opsin.	G protein subunit alpha transducin 2.	0.673
ENSPPYP00000023356	GNAT3	ENSPPYP00000023356	ENSPPYP00000020019	Long/medium wavelength-sensitive opsin.	GNAT3 isoform 1.	0.596
ENSPPYP00000023356	GNG12	ENSPPYP00000023356	ENSPPYP00000001459	Long/medium wavelength-sensitive opsin.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.440
ENSPPYP00000023356	GNG3	ENSPPYP00000023356	ENSPPYP00000003639	Long/medium wavelength-sensitive opsin.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.555
ENSPPYP00000023356	GNGT2	ENSPPYP00000023356	ENSPPYP00000010004	Long/medium wavelength-sensitive opsin.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.702
ENSPPYP00000023356	OPN1SW	ENSPPYP00000023356	ENSPPYP00000020174	Long/medium wavelength-sensitive opsin.	Opsin 1, short wave sensitive.	0.753
ENSPPYP00000023356	RGR	ENSPPYP00000023356	ENSPPYP00000002652	Long/medium wavelength-sensitive opsin.	RGR isoform 1; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily.	0.664
ENSPPYP00000023356	RHO	ENSPPYP00000023356	ENSPPYP00000015003	Long/medium wavelength-sensitive opsin.	Rhodopsin.	0.477
GNAT2	ENSPPYP00000007387	ENSPPYP00000001240	ENSPPYP00000007387	G protein subunit alpha transducin 2.	annotation not available	0.809
GNAT2	ENSPPYP00000023356	ENSPPYP00000001240	ENSPPYP00000023356	G protein subunit alpha transducin 2.	Long/medium wavelength-sensitive opsin.	0.673