STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGPL1Sphingosine-1-phosphate lyase 1; Cleaves phosphorylated sphingoid bases (PSBs), such as sphingosine-1-phosphate, into fatty aldehydes and phosphoethanolamine. Elevates stress-induced ceramide production and apoptosis (By similarity). Required for global lipid homeostasis in liver and cholesterol homeostasis in fibroblasts. Involved in the regulation of pro-inflammatory response and neutrophil trafficking. Modulates neuronal autophagy via phosphoethanolamine production which regulates accumulation of aggregate-prone proteins such as APP (By similarity). Seems to play a role in establish [...] (568 aa)    
Predicted Functional Partners:
SPHK1
SPHK1 isoform 7.
 
 0.978
SPHK2
SPHK2 isoform 2.
  
 0.978
SGPP1
Sphingosine-1-phosphate phosphatase 1.
    
 0.974
SGPP2
SGPP2 isoform 1.
    
 0.972
PLPP3
T0071805 isoform 3.
    
 0.933
PLPP2
PLPP2 isoform 1.
    
 0.931
ADAMTS14
ADAMTS14 isoform 1.
      
 0.663
RTN4
Reticulon.
   
 
 0.635
ABAT
ABAT isoform 1; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.612
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.576
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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