STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDH15PCDH15 isoform 18. (1163 aa)    
Predicted Functional Partners:
CDH23
CDH23 isoform 1.
   
0.986
CR201_G0030294
CDH23 isoform 6.
 
 
 0.977
USH1C
USH1C isoform 9.
   
 
 0.929
CR201_G0023224
MYO7A isoform 2.
   
 0.901
USH1G
USH1G isoform 1.
   
 0.824
USH2A
USH2A isoform 2.
   
  
 0.796
ADGRV1
ADGRV1 isoform 3; Belongs to the G-protein coupled receptor 2 family.
      
 0.789
CLIC5
Chloride intracellular channel protein; Belongs to the chloride channel CLIC family.
      
 0.739
STOX1
STOX1 isoform 1.
      
 0.702
OTOP2
OTOP2 isoform 2.
      
 0.699
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.