STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDB1LIM domain binding 1. (411 aa)    
Predicted Functional Partners:
TAL1
TAL1 isoform 1.
    
 0.974
LMO2
LMO2 isoform 1.
    
 0.957
SSBP2
Single stranded DNA binding protein 2.
   
 
 0.881
GATA1
GATA1 isoform 1.
    
 0.846
KLF1
Kruppel like factor 1.
    
 
 0.803
GATA2
GATA2 isoform 1.
    
 0.785
LMX1B
LMX1B isoform 4.
    
 0.765
LMO1
LMO1 isoform 3.
    
 0.757
LMO3
LIM domain only protein 3.
    
 0.757
TCF3
TCF3 isoform 5.
   
 0.720
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.