STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
INAINA isoform 1; Belongs to the intermediate filament family. (499 aa)    
Predicted Functional Partners:
NEFL
Neurofilament light polypeptide; Neurofilaments usually contain three intermediate filament proteins: L, M, and H which are involved in the maintenance of neuronal caliber.
   
 
0.701
LMO4
LIM domain only 4.
    
 
 0.568
NEFH
NEFH isoform 1; Belongs to the intermediate filament family.
   
 
0.566
NSMF
NSMF isoform 4.
    
 
 0.532
GRIN1
GRIN1 isoform 3.
   
 0.507
CR201_G0005182
NEFM isoform 1; Belongs to the intermediate filament family.
   
 
0.502
ENSPPYP00000012305
annotation not available
   
 
0.482
ASPH
ASPH isoform 1.
   
 0.451
GAN
GAN isoform 1.
    
 0.423
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.