Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBM20RBM20 isoform 1. (1191 aa)    
Predicted Functional Partners:
MLIP
MLIP isoform 11.
   
    0.950
COL18A1
COL18A1 isoform 3.
    
 0.675
RAVER2
RAVER2 isoform 1.
      
 0.625
ECHS1
Enoyl-CoA hydratase, mitochondrial; Straight-chain enoyl-CoA thioesters from C4 up to at least C16 are processed, although with decreasing catalytic rate (By similarity). Has high substrate specificity for crotonyl-CoA and moderate specificity for acryloyl-CoA, 3-methylcrotonyl-CoA and methacrylyl-CoA. It is noteworthy that binds tiglyl-CoA, but hydrates only a small amount of this substrate (By similarity); Belongs to the enoyl-CoA hydratase/isomerase family.
    
 
 0.621
MYBPC3
MYBPC3 isoform 2.
   
 0.619
EIF2AK3
EIF2AK3 isoform 1.
     
 0.617
KIF27
LOW QUALITY PROTEIN: kinesin-like protein KIF27.
    
 
 0.617
MTMR9
MTMR9 isoform 1.
    
 
 0.616
CHD7
Chromodomain helicase DNA binding protein 7.
    
 0.616
TTN
TTN isoform 4.
   
 0.602
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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