Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMNTD2LMNTD2 isoform 1. (613 aa)    
Predicted Functional Partners:
RIMS4
RIMS4 isoform 1.
   
  
 0.661
EMD
EMD isoform 1.
    
 0.508
SYCP1
Synaptonemal complex protein 1.
    
 
 0.493
BANF1
Barrier-to-autointegration factor, N-terminally processed; Plays fundamental roles in nuclear assembly, chromatin organization, gene expression and gonad development. May potently compress chromatin structure and be involved in membrane recruitment and chromatin decondensation during nuclear assembly. Contains 2 non- specific dsDNA-binding sites which may promote DNA cross-bridging. Belongs to the BAF family.
    
 0.492
BANF2
Barrier to autointegration factor 2.
    
 0.492
LEMD3
LEMD3 isoform 1.
    
 0.488
RBM23
RBM23 isoform 2.
    
 0.488
RBM39
RNA-binding protein 39; Transcriptional coactivator for steroid nuclear receptors ESR1/ER-alpha and ESR2/ER-beta, and JUN/AP-1 (By similarity). May be involved in pre-mRNA splicing process.
    
 0.488
SLC44A5
SLC44A5 isoform 1; Belongs to the CTL (choline transporter-like) family.
      
 0.486
SLC44A2
Choline transporter-like protein 2; Choline transporter; Belongs to the CTL (choline transporter-like) family.
      
 0.486
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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