Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COP1 | COPS2 | ENSPPYP00000000553 | ENSPPYP00000007321 | COP1 E3 ubiquitin ligase. | COP9 signalosome subunit 2. | 0.523 |
COP1 | CUL4A | ENSPPYP00000000553 | ENSPPYP00000006296 | COP1 E3 ubiquitin ligase. | CUL4A isoform 5; Belongs to the cullin family. | 0.824 |
COP1 | CUL4B | ENSPPYP00000000553 | ENSPPYP00000023154 | COP1 E3 ubiquitin ligase. | CUL4B isoform 4; Belongs to the cullin family. | 0.696 |
COP1 | DDB1 | ENSPPYP00000000553 | ENSPPYP00000003683 | COP1 E3 ubiquitin ligase. | DNA damage-binding protein 1; Required for DNA repair. Binds to DDB2 to form the UV-damaged DNA-binding protein complex (the UV-DDB complex). The UV-DDB complex may recognize UV-induced DNA damage and recruit proteins of the nucleotide excision repair pathway (the NER pathway) to initiate DNA repair. The UV-DDB complex preferentially binds to cyclobutane pyrimidine dimers (CPD), 6-4 photoproducts (6-4 PP), apurinic sites and short mismatches. Also appears to function as a component of numerous distinct DCX (DDB1-CUL4-X-box) E3 ubiquitin-protein ligase complexes which mediate the ubiqui [...] | 0.978 |
COP1 | DDB2 | ENSPPYP00000000553 | ENSPPYP00000003799 | COP1 E3 ubiquitin ligase. | Damage specific DNA binding protein 2. | 0.967 |
COP1 | ERCC8 | ENSPPYP00000000553 | ENSPPYP00000017309 | COP1 E3 ubiquitin ligase. | ERCC excision repair 8, CSA ubiquitin ligase complex subunit. | 0.950 |
COP1 | RBX1 | ENSPPYP00000000553 | ENSPPYP00000013235 | COP1 E3 ubiquitin ligase. | RBX1 isoform 1. | 0.903 |
COP1 | TP53 | ENSPPYP00000000553 | ENSPPYP00000008923 | COP1 E3 ubiquitin ligase. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.945 |
COPS2 | COP1 | ENSPPYP00000007321 | ENSPPYP00000000553 | COP9 signalosome subunit 2. | COP1 E3 ubiquitin ligase. | 0.523 |
COPS2 | CUL4A | ENSPPYP00000007321 | ENSPPYP00000006296 | COP9 signalosome subunit 2. | CUL4A isoform 5; Belongs to the cullin family. | 0.906 |
COPS2 | CUL4B | ENSPPYP00000007321 | ENSPPYP00000023154 | COP9 signalosome subunit 2. | CUL4B isoform 4; Belongs to the cullin family. | 0.961 |
COPS2 | DDB1 | ENSPPYP00000007321 | ENSPPYP00000003683 | COP9 signalosome subunit 2. | DNA damage-binding protein 1; Required for DNA repair. Binds to DDB2 to form the UV-damaged DNA-binding protein complex (the UV-DDB complex). The UV-DDB complex may recognize UV-induced DNA damage and recruit proteins of the nucleotide excision repair pathway (the NER pathway) to initiate DNA repair. The UV-DDB complex preferentially binds to cyclobutane pyrimidine dimers (CPD), 6-4 photoproducts (6-4 PP), apurinic sites and short mismatches. Also appears to function as a component of numerous distinct DCX (DDB1-CUL4-X-box) E3 ubiquitin-protein ligase complexes which mediate the ubiqui [...] | 0.906 |
COPS2 | DDB2 | ENSPPYP00000007321 | ENSPPYP00000003799 | COP9 signalosome subunit 2. | Damage specific DNA binding protein 2. | 0.962 |
COPS2 | ERCC8 | ENSPPYP00000007321 | ENSPPYP00000017309 | COP9 signalosome subunit 2. | ERCC excision repair 8, CSA ubiquitin ligase complex subunit. | 0.776 |
COPS2 | RBX1 | ENSPPYP00000007321 | ENSPPYP00000013235 | COP9 signalosome subunit 2. | RBX1 isoform 1. | 0.977 |
CUL4A | COP1 | ENSPPYP00000006296 | ENSPPYP00000000553 | CUL4A isoform 5; Belongs to the cullin family. | COP1 E3 ubiquitin ligase. | 0.824 |
CUL4A | COPS2 | ENSPPYP00000006296 | ENSPPYP00000007321 | CUL4A isoform 5; Belongs to the cullin family. | COP9 signalosome subunit 2. | 0.906 |
CUL4A | CUL4B | ENSPPYP00000006296 | ENSPPYP00000023154 | CUL4A isoform 5; Belongs to the cullin family. | CUL4B isoform 4; Belongs to the cullin family. | 0.777 |
CUL4A | DDB1 | ENSPPYP00000006296 | ENSPPYP00000003683 | CUL4A isoform 5; Belongs to the cullin family. | DNA damage-binding protein 1; Required for DNA repair. Binds to DDB2 to form the UV-damaged DNA-binding protein complex (the UV-DDB complex). The UV-DDB complex may recognize UV-induced DNA damage and recruit proteins of the nucleotide excision repair pathway (the NER pathway) to initiate DNA repair. The UV-DDB complex preferentially binds to cyclobutane pyrimidine dimers (CPD), 6-4 photoproducts (6-4 PP), apurinic sites and short mismatches. Also appears to function as a component of numerous distinct DCX (DDB1-CUL4-X-box) E3 ubiquitin-protein ligase complexes which mediate the ubiqui [...] | 0.994 |
CUL4A | DDB2 | ENSPPYP00000006296 | ENSPPYP00000003799 | CUL4A isoform 5; Belongs to the cullin family. | Damage specific DNA binding protein 2. | 0.950 |
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