Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEP126CEP126 isoform 1. (1089 aa)    
Predicted Functional Partners:
ZNF703
ZNF703 isoform 1.
      
 0.637
STOX1
STOX1 isoform 1.
      
 0.533
TOPAZ1
TOPAZ1 isoform 1.
    
 
 0.522
RTTN
RTTN isoform 2.
    
 
 0.510
SCAPER
SCAPER isoform 10.
      
 0.509
CCDC13
Coiled-coil domain-containing protein 13.
      
 0.503
CEP85L
Centrosomal protein 85 like.
     
 0.502
CCDC12
Coiled-coil domain containing 12.
     
 0.501
ZMYND11
Zinc finger MYND-type containing 11.
    
 
 0.488
CCDC18
Coiled-coil domain containing 18.
      
 0.486
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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