Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMP7MMP7 isoform 1. (267 aa)    
Predicted Functional Partners:
SPP1
SPP1 isoform 6.
   
 0.921
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 
 0.917
CNOT11
CCR4-NOT transcription complex subunit 11.
    
   0.915
CNOT6L
CNOT6L isoform 1.
    
   0.915
CR201_G0011084
CD44 isoform 1.
    
 0.862
CNOT10
CNOT10 isoform 1.
    
   0.858
CNOT3
CNOT3 isoform 7.
    
   0.840
MMP2
MMP2 isoform 3.
   
 0.833
CNOT6
CCR4-NOT transcription complex subunit 6.
    
   0.833
CNOT1
CCR4-NOT transcription complex subunit 1.
    
   0.813
Your Current Organism:
Pongo abelii
NCBI taxonomy Id: 9601
Other names: Orang-utan, Orangutan, P. abelii, Pongo pygmaeus abeli, Pongo pygmaeus abelii, Sumatran orangutan, orang utan
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